Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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Genetic Variation
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Gene: scpl16 AT3G12220

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Description

serine carboxypeptidase-like 16 [Source:NCBI gene (formerly Entrezgene);Acc:820402]

Gene Synonyms

serine carboxypeptidase-like 16

Location

Chromosome 3: 3,896,207-3,899,019 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 580 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
scpl16-201	AT3G12220.1	1736	435aa	AT3G12220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C7D4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
scpl16-202	AT3G12220.2	1731	405aa	AT3G12220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRY3	-	-
scpl16-203	AT3G12220.3	1256	383aa	AT3G12220.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRY2	-	-

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Literature

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Showing the top 4 hits from Europe PubMed Central

PubMed ID	Title	Authors	Journal
41992536	CP26 is not involved in qE- or qZ-type non-photochemical quenching in Arabidopsis.	Walter J, Patel-Tupper D, Lam L, Ma A, Taylor G, Leverett A, Fleming GR, Niyogi KK, Kromdijk J.	Plant Physiol 201 (1) 2026
39404105	Transcriptome analysis reveals role of transcription factor WRKY70 in early N-hydroxy-pipecolic acid signaling.	Foret J, Kim JG, Sattely ES, Mudgett MB.	Plant Physiol 197 (1) 2024
32670320	Genome-Wide Analysis of Serine Carboxypeptidase-Like Acyltransferase Gene Family for Evolution and Characterization of Enzymes Involved in the Biosynthesis of Galloylated Catechins in the Tea Plant (Camellia sinensis).	Ahmad MZ, Li P, She G, Xia E, Benedito VA, Wan XC, Zhao J.	Front Plant Sci 11 2020
25265161	Systems responses to progressive water stress in durum wheat.	Habash DZ, Baudo M, Hindle M, Powers SJ, Defoin-Platel M, Mitchell R, Saqi M, Rawlings C, Latiri K, Araus JL, Abdulkader A, Tuberosa R, Lawlor DW, Nachit MM.	PLoS One 9 (9) 2014

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