Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history
Sorghumbase Search

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Gene: SbiPI533831.04g000020

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Description

SbiPI533831.04g000020

Location

Chromosome 4: 35,427-42,092 reverse strand.

About this gene

This gene has 8 transcripts (splice variants), 81 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	SbiPI533831.04g000020_T004.1	2476	428aa	SbiPI533831.04g000020_P004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	SbiPI533831.04g000020_T002.1	2395	411aa	SbiPI533831.04g000020_P002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T007.1	2297	411aa	SbiPI533831.04g000020_P007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T005.1	2264	508aa	SbiPI533831.04g000020_P005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T001.1	2211	491aa	SbiPI533831.04g000020_P001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T003.1	2202	490aa	SbiPI533831.04g000020_P003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T006.1	2076	488aa	SbiPI533831.04g000020_P006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T008.1	2049	479aa	SbiPI533831.04g000020_P008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Plant Compara

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Genomic alignments (Not available)

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data