Transcript: SbiPI533831.04g000020_T005.1

Description

SbiPI533831.04g000020

Location

Chromosome 4: 35,489-42,092 reverse strand.

About this transcript

This transcript has 15 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene SbiPI533831.04g000020.1 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	SbiPI533831.04g000020_T004.1	2476	428aa	SbiPI533831.04g000020_P004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	SbiPI533831.04g000020_T002.1	2395	411aa	SbiPI533831.04g000020_P002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T007.1	2297	411aa	SbiPI533831.04g000020_P007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T005.1	2264	508aa	SbiPI533831.04g000020_P005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T001.1	2211	491aa	SbiPI533831.04g000020_P001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T003.1	2202	490aa	SbiPI533831.04g000020_P003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T006.1	2076	488aa	SbiPI533831.04g000020_P006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbiPI533831.04g000020_T008.1	2049	479aa	SbiPI533831.04g000020_P008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,264 bps, Translation length: 508 residues

Version

SbiPI533831.04g000020_T005.1

Type

Protein coding

Annotation Method

Gene annotation by warelab in CSHL using a pan-gene working set from reference genomes as source and propagated to new assembly using Liftoff tool, the projected gene structure were further updated using PASA tool

Favourite species

All species

Recent locations

Transcript: SbiPI533831.04g000020_T005.1

Summary