Sb bicolor PI565121 macia (Sb-PI565121-REFERENCE-JGI-1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
SbPI565121.04G004100.v1.1
Chromosome 4: 371,886-378,932 forward strand.
This transcript has 13 exons and is annotated with 5 domains and features.
This transcript is a product of gene SbPI565121.04G004100.v1.1.1 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | Flags |
|---|---|---|---|---|---|---|
| - | SbPI565121.04G004100.1.v1.1.1 | 5218 | 1479aa | SbPI565121.04G004100.1.v1.1.1 | Protein coding | Ensembl Canonical, |
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Exons: 13, Coding exons: 13, Transcript length: 5,218 bps, Translation length: 1,479 residues
SbPI565121.04G004100.1.v1.1.1
Protein coding
Genome annotation was carried out using a standardized DOE Joint Genome Institute and Phytozome pipeline in which each pangenome genome first received independently predicted gene models based on multiple lines of transcript and protein evidence. In a second round, high-confidence models were used to hard-mask each assembly and were projected across the pangenome with BLASTX and EXONERATE to generate additional predictions, followed by filtering and manual curation to retain only well-supported, non-repetitive gene models.
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