Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history
Sorghumbase Search

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Gene: SbPI656057.05G097700.v1.1

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Description

SbPI656057.05G097700.v1.1

Location

Chromosome 5: 55,614,897-55,639,008 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 78 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	SbPI656057.05G097700.1.v1.1.1	5424	1710aa	SbPI656057.05G097700.1.v1.1.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	SbPI656057.05G097700.6.v1.1.1	5561	1229aa	SbPI656057.05G097700.6.v1.1.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbPI656057.05G097700.3.v1.1.1	5315	1533aa	SbPI656057.05G097700.3.v1.1.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbPI656057.05G097700.5.v1.1.1	5283	1232aa	SbPI656057.05G097700.5.v1.1.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbPI656057.05G097700.4.v1.1.1	5207	1635aa	SbPI656057.05G097700.4.v1.1.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	SbPI656057.05G097700.2.v1.1.1	4447	1338aa	SbPI656057.05G097700.2.v1.1.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Plant Compara

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Genomic alignments (Not available)

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data