Ensembl PlantsSorghumbase Home

Statistics on protein trees

The protein tree pipeline is described at the following page.

This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:

Overall Summary

Legend
Internal nodes (ancestral taxa) Node types Speciations Duplications Dubious nodes
Leaves (extant species) Gene tree coverage Genes in multi-species trees Genes in single-species trees Orphaned genes
Gene QC Validated genes Short genes Long genes Split genes
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Sorghum bicolor CNA0019266
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Sorghum bicolor CNA0019257
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-
Sorghum bicolor CNA0019259
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Sorghum bicolor pi506069
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Sorghum bicolor CNA0019267
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Sorghum bicolor CNA0019256
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Sorghum bicolor CNA0019263
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Sorghum bicolor CNA0019258
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Sorghum bicolor CNA0019264
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Sorghum bicolor CNA0019255
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Sorghum bicolor CNA0019265
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Sorghum bicolor CNA0019262
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Sorghum bicolor ChineseAmber
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Sorghum bicolor CNA0019261
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Sorghum bicolor pi329311
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Sorghum bicolor pi655972
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Sorghum bicolor pi297155
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Sorghum bicolor CNA0019260
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Sorghum bicolor pi229841
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Sorghum bicolor Leoti
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Sorghum bicolor pi510757
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Sorghum bicolor Sorghum_bicolor-Tx436-Reference-CSHL-USDA-1.0
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Sorghum bicolor Corteva_Sorghum_ONT_TX430_1.0
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Sorghum bicolor Sorghum_bicolor_NCBIv3
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Sorghum bicolor Sb-BTX623-REFERENCE-JGI-5.1
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Sorghum bicolor Sorghum_bicolor-Tx2783-Reference-CSHL-USDA-1.0
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Sorghum bicolor Rio
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Sorghum bicolor JGI-v2.0
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Sorghum bicolor grassl
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Zea maysB73
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Oryza sativa Japonica Group
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Vitis vinifera
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Populus trichocarpa
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Arabidopsis thaliana
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Selaginella moellendorffii
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Chlamydomonas reinhardtii
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Drosophila melanogaster