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Sequence and assembly

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Contigs

Track showing underlying assembly contigs.
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Genes and transcripts

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Gene (CSHL non_coding)

Gene annotation by warelab in CSHL using a pan-gene working set from reference genomes as source and propagated to new assembly using Liftoff tool, the projected gene structure were further updated using PASA tool, those models that have no evidence and less than 55 aa in translation were classified as non_coding
Gene (CSHL)

Gene annotation by warelab in CSHL using a pan-gene working set from reference genomes as source and propagated to new assembly using Liftoff tool, the projected gene structure were further updated using PASA tool

Variation

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EVA2024_rsID_mapped (Variants from EVA2024rsID_PRJEB51985)
EVA2024_rsID_mapped_nra (Variants from EVA2024rsID_nra_PRJEB51985)

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