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Sb bicolor (margaritiferum) IS19953 (CNA0019258) ▼

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About Sorghum IS19953

IS19953 is a landrace of Sorghum bicolor collected at Namari (15.029999, -13.779999) in the province of Ferlo in Senegal. Its name is Nieniko and alternate identifiers are PI 514293 (USDA) and Sg. 1678 (IBPGR). It is considered to belong to the margaritiferum group, previously considered a sub-race of the guinea race. It was re-sequenced to broaden the sampling of the margaritiferum group to include an accession from Senegal.

Taxonomy ID 4558

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Genome assembly: CNA0019258

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Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

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Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

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Phylogenetic overview of gene families

Example variant

Variation

What can I find? Short sequence variants.

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  1. USDA GRIN GLOBAL: https://npgsweb.ars-grin.gov/gringlobal/accessiondetail?id=1409229
  2. ICRISAT passport data: http://genebank.icrisat.org/IND/PassportSummary?ID=IS%2019953
  3. ICRISAT characterisation data: http://genebank.icrisat.org/IND/Char_Sorghum?Crop=Sorghum
  4. FAO passport data: https://ssl.fao.org/glis/doi/10.18730/NHEH4

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General information about this species can be found in Wikipedia.